| Tool name | PathogenMIPer |
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| URL | http://www.ncbi.nlm.nih.gov/pmc/articles/PMC1657037/?tool=pubmed |
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| Important features | 1. Involves in designing probes to detect large number of SNPs and helps in identifying microbial subtypes.
2. Designs oligonucleotide probes targeting microbial or other genomes. This probe is a linear oligonucleotide with target-complementary sequences at the ends and a non-complementary linking segment in between. |
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| Citations | Thiyagarajan S, Karhanek M, Akhras M, Davis RW, Pourmand N. PathogenMIPer: a
tool for the design of molecular inversion probes to detect multiple pathogens.
BMC Bioinformatics. 2006 Nov 14;7:500. PubMed PMID: 17105657. |
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| Year of publication | 2006 |
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| Rank by usage frequency | 100 |
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| Comments | Features are written as claimed by the author. Not validated completely. |
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| Function | SNP primers, Pathogen specific primers, Primer specificity checking, Masking the repeat sequence |
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| Category | Downloadable, Free |
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| Features | 1. Software program for designing molecular inversion probe (MIP) oligonucleotides for use in pathogen identification and detection.
2. The software designs unique and specific oligonucleotide probes targeting microbial or other genomes. |
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| Description | |
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